QTL_BSA_in_Python
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  • QTL_BSA_in_Python
    • Citations
    • Prerequisite Software Tools:
    • Examples:
    • Load/install libraries
    • Pre-Filtering Rules
    • VCF Format Fields and Bulk Segregant Sample Names
    • R Script
    • GATK (Non-Biased)
    • Python Script
    • Standard RStudio Console Output
    • Analysis Plots: Number of SNPs called in window, SNP ratio, G Statistic and Delta AF or change in Allelic Frequencies
      • Sorghum Semi-Dwarfism
QTL_BSA_in_Python
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